BioGraph

In the context of Gram-Negative Facultatively Anaerobic Rods, Gram-Negative Bacteria has rank 20 out of 485 'Organism' concepts (top 4.12%).

Gram-Negative Facultatively Anaerobic Rods: A large group of facultatively anaerobic, rod-shaped bacteria that show up as pink (negative) when treated by the gram-staining method.[...]

Gram-Negative Bacteria: Bacteria which lose crystal violet stain but are stained pink when treated by Gram's method.[...]

This is a known relation: The relation among these concepts has been integrated in BioGraph's knowledge base as a known relation.

Score	Value
Ranking score	3.1676636263826783
Global rank	0.03% (20th out of 70994 entities)
Organism rank	4.12% (20th out of 485 'Organism' entities)

Putative functional relations

The following trails provide putative functional links between Gram-Negative Facultatively Anaerobic Rods (context) and Gram-Negative Bacteria (target)

Click the links in the network to explore intermediate links.

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Edges

From	To	Support
Gram-Negative Bacteria	Gram-Negative Facultatively Anaerobic Rods	Explain
Gram-Negative Bacteria	Buchnera <proteobacteria>	Explain
Buchnera <proteobacteria>	Enterobacteriaceae	Explain
Enterobacteriaceae	Gram-Negative Facultatively Anaerobic Rods	Explain
Gram-Negative Bacteria	Ornithobacterium	Explain
Ornithobacterium	Flavobacteriaceae	Explain
Flavobacteriaceae	Capnocytophaga	Explain
Capnocytophaga	Gram-Negative Facultatively Anaerobic Rods	Explain
Rahnella	Gram-Negative Facultatively Anaerobic Rods	Explain
Enterobacteriaceae	Rahnella	Explain
Gram-Negative Bacteria	Piscirickettsiaceae	Explain
Piscirickettsiaceae	Gammaproteobacteria	Explain
Vibrionaceae	Gram-Negative Facultatively Anaerobic Rods	Explain
Oceanospirillaceae	Gammaproteobacteria	Explain
Gammaproteobacteria	Aeromonadaceae	Explain
Aeromonadaceae	Gram-Negative Facultatively Anaerobic Rods	Explain
Gram-Negative Bacteria	Oceanospirillaceae	Explain
Gammaproteobacteria	Vibrionaceae	Explain
Gram-Negative Bacteria	Bacteria	Explain
Bacteria	Phylum Fusobacteria	Explain
Phylum Fusobacteria	Streptobacillus	Explain
Streptobacillus	Gram-Negative Facultatively Anaerobic Rods	Explain
Gammaproteobacteria	Pasteurellaceae	Explain
Pasteurellaceae	Gram-Negative Facultatively Anaerobic Rods	Explain

Publications

The BioGraph contains no references to the literature for this relation.^?Note that not all databases contain references to the literature (e.g., for gene ontology annotations, pathway memberships, disease relatedness, protein domain annotations, ...)

Literature search on PubMed for this relation:

Srichana et al., Antimicrobial activity of Gynostemma pentaphyllum extracts against fungi producing aflatoxin and fumonisin and bacteria causing diarrheal disease. (2011)
Hoq et al., Triclosan-lysozyme complex as novel antimicrobial macromolecule: a new potential of lysozyme as phenolic drug-targeting molecule. (2008)
Ferreira et al., Root canal microbiota of dogs' teeth with periapical lesions induced by two different methods. (2006)
Lin et al., Zobellella denitrificans gen. nov., sp. nov. and Zobellella taiwanensis sp. nov., denitrifying bacteria capable of fermentative metabolism. (2006)
Uraz et al., Detection of ticarcillin-clavulonic acid susceptibility with microdilution method in Citrobacter, Hafnia, Proteus and some gram negative bacteria. (2004)
Denoeud et al., Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource. (2004)
Critchley et al., In vitro synergy studies using aztreonam and fluoroquinolone combinations against six species of Gram-negative bacilli. (2003)
Hamouda et al., Antimicrobial mechanism of action of surfactant lipid preparations in enteric Gram-negative bacilli. (2000)
Bourbeau et al., Comparison of Vitek GNI and GNI+ cards for identification of gram-negative bacteria. (1998)
Dott et al., [Microbiologic/hygienic evaluation of the risk potential of bacteria from soil and water sources in combination with biotechnologic risks of soil restoration]. (1997)
Tiwana et al., Antibodies to four gram-negative bacteria in rheumatoid arthritis which share sequences with the rheumatoid arthritis susceptibility motif. (1996)
Trotot et al., Comparative analysis of the cya locus in enterobacteria and related gram-negative facultative anaerobes. (1996)
Salmon et al., Evaluation of a commercial system for the identification of gram-negative, nonfermenting bacteria of veterinary importance. (1995)
Spiro et al., The FNR family of transcriptional regulators. (1994)
Hurek et al., 16S rRNA-targeted polymerase chain reaction and oligonucleotide hybridization to screen for Azoarcus spp., grass-associated diazotrophs. (1993)
Odhiambo et al., Aerobic and facultative bacterial isolates from blood cultures of children with clinically diagnosed septicaemia. (1991)
Munson et al., Evidence for the establishment of aphid-eubacterium endosymbiosis in an ancestor of four aphid families. (1991)
von Graevenitz et al., Fastidious gram-negative, facultatively anaerobic rods: a renewed interest. (1984)

Search for references in external resources:

Resource databases

The following database(s) have been used to integrate this relation into our knowledge base:

Acronym	Name	URL
MeSH	MeSH Hierarchy Relations	http://www.nlm.nih.gov/mesh

Relations between Gram-Negative Facultatively Anaerobic Rods and Gram-Negative Bacteria

Putative functional relations

Edges

Publications

Resource databases

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